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Comma Separated Values - 7.1 KB - MD5: 6a92d54a4b6f24fc86a3a8e7e29fe09e
Data table. Header: true Delimiter: , (comma)
Comma Separated Values - 3.4 KB - MD5: 9aea0e3d82f45c7b9ff66b5a8d599720
Data dictionary of S1_Data.csv. Header: true Delimiter: , (comma)
Dec 18, 2025 - Plant Biotechnology and Bioinformatics
Choudhary, Nancy; Hagedorn, Marie; Pucker, Boas, 2025, "Supplementary data supporting the study: "Out of the blue: Family-wide loss of anthocyanin biosynthesis in Cucurbitaceae"", https://doi.org/10.60507/FK2/ZNVSLA, bonndata, V1
This dataset contains supplementary data supporting the manuscript "Out of the blue: Family-wide loss of anthocyanin biosynthesis in Cucurbitaceae". In this large-scale phylogenomics study, we discovered the systemic absence of anthocyanin and proanthocyanidin biosynthesis genes in the Cucurbitaceae family. The structural genes DFR, ANS, arGST, LAR...
Comma Separated Values - 50.4 KB - MD5: 6349019a3d9a25b2d52db69957243d10
List of BUSCO genes from eudictoyledons_odb12 lineage used for coalescence and concatenation-based species phylogeny
Comma Separated Values - 48.7 KB - MD5: 5e1581a14a019d45774fe557a1e12a8d
List of reference sequences used for phylogenetic trees
Gzip Archive - 5.8 MB - MD5: 76582297191abb036adfb1cd7d07c96c
Coding sequences used for constructing individual gene phylogenetic trees in FASTA format.
Comma Separated Values - 36.4 KB - MD5: 3e5fd89ec0b5c62d0b40ec9e8097a8ff
Sources of genomic and transcriptomic datasets used in the study
Gzip Archive - 1.1 GB - MD5: 1fa4521900ba3fbab3d589936a2c3849
Gene expression data of selected datasets used for expression analysis. File names are based on the plant species name. Each sub-folder contains the reference sequence (*.cds.fa & *.pep.fa), and a count table with the expression data (*.tpms.txt).
Comma Separated Values - 13.6 KB - MD5: 0d2e5292f31213e8b98d08d54fde165b
Links to websites used as reference for mapping fruit and flower colours used in Figure 2.
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