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Publication Year: 2025

41 to 50 of 1,117 Results

Additional_file_4C_promoters_UTR.fa Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR Unknown - 10.5 KB - MD5: c9ca433fef34a19f2c4a863be828957e Contains promoter and 5’ untranslated region (UTR) sequences for LAR1 and LAR2 genes from all species analyzed.
Additional_file_4D_LAR_reads_mapping_Tcacao.bam Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR Gzip Archive - 7.9 MB - MD5: 898b2d90fcc8fecb4b364cf5c498a3d9 Contains the RNA-seq read mapping to Theobroma cacao LAR1 and LAR2 loci for promoter analysis.
Additional_file_4E_LAR_reads_mapping_Moleifera.bam Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR Gzip Archive - 5.9 MB - MD5: 39ca19c8b59f574a734177b652d3942a Contains the RNA-seq read mapping to Moringa oleifera LAR1 and LAR2 loci for promoter analysis.
Additional_file_5_sinteny_LAR1.csv Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR Comma Separated Values - 2.6 KB - MD5: aec95a95e88bc3a58d15c54162a28f68 Synteny connections for LAR1 (indicated with *) across five plant species (Vitis vinifera, Theobroma cacao, Moringa oleifera, Carica papaya, and Bretschneidera sinensis). A dot (.) indicates absence of a corresponding syntenic gene in that species.
Additional_file_5_sinteny_LAR1_brassicales.csv Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR Comma Separated Values - 4.4 KB - MD5: 9c2f74bf6eec197ccc31233e1bdc7be8 Synteny connections for LAR1 in Brassicales (indicated with *), listing syntenic genes only among the Brassicales species: Moringa oleifera, Carica papaya, Bretschneidera sinensis, Capsella rubella, Boechera stricta, Arabidopsis thaliana, Arabidopsis halleri, Eutrema salsugineum, and Brassica rapa. A dot (.) indicates absence of a corresponding syn...
Additional_file_5_sinteny_LAR2.csv Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR Comma Separated Values - 4.2 KB - MD5: f31c5523783b88d12c6a29d0a94682bd Synteny connections for LAR2 (indicated with *) across five plant species (Vitis vinifera, Theobroma cacao, Moringa oleifera, Carica papaya, and Bretschneidera sinensis). A dot (.) indicates absence of a corresponding syntenic gene in that species.
Additional_file_6A_AA_LAR_ANR_DFR.fasta Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR Unknown - 404.9 KB - MD5: 482e4909f86ac25b7c526fd034982b45 Contains polypeptide sequences of LAR, ANR, and DFR.
Additional_file_6B_CDS_LAR_ANR_DFR.fasta Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR Unknown - 724.9 KB - MD5: 3fbe7af9ad0629bf38b73770a76d90f0 Contains coding sequences (CDS) of LAR, ANR, and DFR.
Code and scripts for ``Matching Lagrangian and Hamiltonian Simulations in (2+1)-dimensional U(1) Gauge Theory'' Aug 20, 2025 Groß, Christiane Franziska; Romiti, Simone; Funcke, Lena; Jansen, Karl; Kan, Angus; Kühn, Stefan; Urbach, Carsten, 2025, "Code and scripts for ``Matching Lagrangian and Hamiltonian Simulations in (2+1)-dimensional U(1) Gauge Theory''", https://doi.org/10.60507/FK2/AUJJ08, bonndata, V1 At finite lattice spacing, Lagrangian and Hamiltonian predictions differ due to discretization effects. In the Hamiltonian limit, i.e. at vanishing temporal lattice spacing a_t, the path integral approach in the Lagrangian formalism reproduces the results of the Hamiltonian theory. In this work, we numerically calculate the Hamiltonian limit of a U...
data.zip Aug 20, 2025 - Code and scripts for ``Matching Lagrangian and Hamiltonian Simulations in (2+1)-dimensional U(1) Gauge Theory'' ZIP Archive - 257.7 KB - MD5: 9c1052c22417070b3c96a2ac30007058

Additional_file_4C_promoters_UTR.fa

Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR

Unknown - 10.5 KB -

Contains promoter and 5’ untranslated region (UTR) sequences for LAR1 and LAR2 genes from all species analyzed.

Additional_file_4D_LAR_reads_mapping_Tcacao.bam

Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR

Gzip Archive - 7.9 MB -

Contains the RNA-seq read mapping to Theobroma cacao LAR1 and LAR2 loci for promoter analysis.

Additional_file_4E_LAR_reads_mapping_Moleifera.bam

Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR

Gzip Archive - 5.9 MB -

Contains the RNA-seq read mapping to Moringa oleifera LAR1 and LAR2 loci for promoter analysis.

Additional_file_5_sinteny_LAR1.csv

Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR

Comma Separated Values - 2.6 KB -

Synteny connections for LAR1 (indicated with *) across five plant species (Vitis vinifera, Theobroma cacao, Moringa oleifera, Carica papaya, and Bretschneidera sinensis). A dot (.) indicates absence of a corresponding syntenic gene in that species.

Additional_file_5_sinteny_LAR1_brassicales.csv

Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR

Comma Separated Values - 4.4 KB -

Synteny connections for LAR1 in Brassicales (indicated with *), listing syntenic genes only among the Brassicales species: Moringa oleifera, Carica papaya, Bretschneidera sinensis, Capsella rubella, Boechera stricta, Arabidopsis thaliana, Arabidopsis halleri, Eutrema salsugineum, and Brassica rapa. A dot (.) indicates absence of a corresponding syn...

Additional_file_5_sinteny_LAR2.csv

Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR

Comma Separated Values - 4.2 KB -

Synteny connections for LAR2 (indicated with *) across five plant species (Vitis vinifera, Theobroma cacao, Moringa oleifera, Carica papaya, and Bretschneidera sinensis). A dot (.) indicates absence of a corresponding syntenic gene in that species.

Additional_file_6A_AA_LAR_ANR_DFR.fasta

Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR

Unknown - 404.9 KB -

Contains polypeptide sequences of LAR, ANR, and DFR.

Additional_file_6B_CDS_LAR_ANR_DFR.fasta

Aug 22, 2025 - Supplementary data to Evolutionary Dynamics of the Proanthocyanidin Biosynthesis Gene LAR

Unknown - 724.9 KB -

Contains coding sequences (CDS) of LAR, ANR, and DFR.

Code and scripts for ``Matching Lagrangian and Hamiltonian Simulations in (2+1)-dimensional U(1) Gauge Theory''

Aug 20, 2025

Groß, Christiane Franziska; Romiti, Simone; Funcke, Lena; Jansen, Karl; Kan, Angus; Kühn, Stefan; Urbach, Carsten, 2025, "Code and scripts for ``Matching Lagrangian and Hamiltonian Simulations in (2+1)-dimensional U(1) Gauge Theory''", https://doi.org/10.60507/FK2/AUJJ08, bonndata, V1

At finite lattice spacing, Lagrangian and Hamiltonian predictions differ due to discretization effects. In the Hamiltonian limit, i.e. at vanishing temporal lattice spacing a_t, the path integral approach in the Lagrangian formalism reproduces the results of the Hamiltonian theory. In this work, we numerically calculate the Hamiltonian limit of a U...

data.zip

Aug 20, 2025 - Code and scripts for ``Matching Lagrangian and Hamiltonian Simulations in (2+1)-dimensional U(1) Gauge Theory''

ZIP Archive - 257.7 KB -

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