Theobroma cacao: Genome Sequences and Annotationsdoi:10.60507/FK2/YQDFT4bonndata2026-08-251Marín Recinos, María Fernanda; Ajayi, Blessing; Wolff, Katharina; Choudhary, Nancy; Vieira Salgado de Oliveira, Julie Anne; Pucker, Boas, 2026, "Theobroma cacao: Genome Sequences and Annotations", https://doi.org/10.60507/FK2/YQDFT4, bonndata, V1Theobroma cacao: Genome Sequences and Annotationsdoi:10.60507/FK2/YQDFT4Marín Recinos, María FernandaAjayi, BlessingWolff, KatharinaChoudhary, NancyVieira Salgado de Oliveira, Julie AnnePucker, BoasbonndataMarin Recinos, Maria2026-08-21Agricultural SciencesMedicine, Health and Life SciencesOtherThe genomes of two Theobroma cacao plants were sequenced with Nanopore long reads. The genome sequence was assembled with hifiasm and the gene models were predicted by GeMoMa. The functional annotation was predicted based on sequence similarity to well characterized Arabidopsis thaliana sequences.<a href="http://creativecommons.org/licenses/by/4.0">CC BY 4.0</a>Cacao genome sequence reveals insights into the flavonoid biosynthesis Maria Fernanda Marin Recinos, Sarah Winnier, Kiersten Lagerhausen, Blessing Ajayi, Katharina Wolff, Ronja Friedhoff, Chiara Marie Dassow, Nancy Choudhary, Boas Pucker bioRxiv 2024.11.23.624982;Cacao genome sequence reveals insights into the flavonoid biosynthesis Maria Fernanda Marin Recinos, Sarah Winnier, Kiersten Lagerhausen, Blessing Ajayi, Katharina Wolff, Ronja Friedhoff, Chiara Marie Dassow, Nancy Choudhary, Boas Pucker bioRxiv 2024.11.23.624982;README_Tcacao.mdtext/markdownTcacao_BONN1.v01.asm.fasta.gzapplication/gzipTcacao_BONN1.v01.v01.cds.fastaapplication/octet-streamTcacao_BONN1.v01.v01.gffapplication/octet-streamTcacao_BONN1.v01.v01.pep.fastaapplication/octet-streamTcacao_BONN1_annot.v01.v01.txttext/plainTcacao_BRAU1.v01.asm.fasta.gzapplication/gzipTcacao_BRAU1.v01.v01.cds.fastaapplication/octet-streamTcacao_BRAU1.v01.v01.gffapplication/octet-streamTcacao_BRAU1.v01.v01.pep.fastaapplication/octet-streamTcacao_BRAU1_annot.v01.v01.txttext/plain