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Part 1: Document Description
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Citation |
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Title: |
Utricularia gibba genome sequence and annotation |
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Identification Number: |
doi:10.60507/FK2/JJ5QZX |
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Distributor: |
bonndata |
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Date of Distribution: |
2026-06-24 |
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Version: |
1 |
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Bibliographic Citation: |
Meckoni, Samuel Nestor; Vieira Salgado de Oliveira, Julie Anne; Pucker, Boas, 2026, "Utricularia gibba genome sequence and annotation", https://doi.org/10.60507/FK2/JJ5QZX, bonndata, V1 |
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Citation |
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Title: |
Utricularia gibba genome sequence and annotation |
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Identification Number: |
doi:10.60507/FK2/JJ5QZX |
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Authoring Entity: |
Meckoni, Samuel Nestor (University of Bonn) |
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Vieira Salgado de Oliveira, Julie Anne (University of Bonn) |
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Pucker, Boas (University of Bonn) |
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Distributor: |
bonndata |
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Access Authority: |
Pucker, Boas |
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Access Authority: |
Meckoni, Samuel Nestor |
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Depositor: |
Meckoni, Samuel |
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Date of Deposit: |
2026-06-24 |
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Holdings Information: |
https://doi.org/10.60507/FK2/JJ5QZX |
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Study Scope |
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Keywords: |
Other |
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Abstract: |
The genome of an Utricularia gibba plant was sequenced with nanopore long reads. The genome sequence was assembled with hifiasm and the gene models were predicted by Helixer, BRAKER3 and GeMoMa. The functional annotation was predicted based on sequence similarity to well characterized Arabidopsis thaliana sequences. |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Notes: |
<a href="http://creativecommons.org/licenses/by/4.0">CC BY 4.0</a> |
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Other Study Description Materials |
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Label: |
daUtrGibb.v01.asm.fasta.gz |
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Text: |
Utricularia gibba genome sequence as FASTA file |
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Notes: |
application/gzip |
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Label: |
daUtrGibb.v01.v01.anno.txt.gz |
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Notes: |
application/gzip |
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Label: |
daUtrGibb.v01.v01.cds.fasta.gz |
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Notes: |
application/gzip |
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Label: |
daUtrGibb.v01.v01.gff.gz |
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Notes: |
application/gzip |
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Label: |
daUtrGibb.v01.v01.longest.isoforms.cds.fasta.gz |
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Notes: |
application/gzip |
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Label: |
daUtrGibb.v01.v01.longest.isoforms.gff.gz |
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Notes: |
application/gzip |
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Label: |
daUtrGibb.v01.v01.longest.isoforms.pep.fasta.gz |
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Notes: |
application/gzip |
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Label: |
daUtrGibb.v01.v01.pep.fasta.gz |
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Notes: |
application/gzip |
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Label: |
md5sums.txt |
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Notes: |
text/plain |
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Label: |
md5sums_gzipped.txt |
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Notes: |
text/plain |
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Label: |
README_daUtrGibb.md |
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Text: |
README file |
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Notes: |
text/markdown |