Utricularia gibba genome sequence and annotation

Name: Utricularia gibba genome sequence and annotation
Published: 2026-06-24
License: http://creativecommons.org/licenses/by/4.0

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Important usage condition: Use and redistribution are governed by CC BY 4.0. Review and comply with the license before using the data.

Persistent identifier: doi:10.60507/FK2/JJ5QZX
Published version: 1.0
Publication date: 2026-06-24
License: CC BY 4.0

Description

The genome of an Utricularia gibba plant was sequenced with nanopore long reads. The genome sequence was assembled with hifiasm and the gene models were predicted by Helixer, BRAKER3 and GeMoMa. The functional annotation was predicted based on sequence similarity to well characterized Arabidopsis thaliana sequences.

Creators

Meckoni, Samuel Nestor
Vieira Salgado de Oliveira, Julie Anne
Pucker, Boas

Keywords

Utricularia gibba, genome sequence, genome annotation, long read sequencing, carnivorous plants

Files

Before downloading: Use and redistribution are governed by CC BY 4.0. Review and comply with the license before using the data.

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daUtrGibb.v01.v01.longest.isoforms.pep.fasta.gz	application/gzip	5384740	MD5 d0bbf4036703f2a51b38c364b97af1c9
daUtrGibb.v01.v01.longest.isoforms.cds.fasta.gz	application/gzip	8145173	MD5 236ee94339bb6a7691687819b99a72f7
daUtrGibb.v01.asm.fasta.gz	application/gzip	32062419	MD5 ec4a8127235682f928cd9eec74ab0640
md5sums.txt	text/plain	546	MD5 16e520d2825f5bbe7a0ea3af4c0285a0
daUtrGibb.v01.v01.anno.txt.gz	application/gzip	682261	MD5 50493cb4e09dfaec5e422bb95e94e0d6
daUtrGibb.v01.v01.longest.isoforms.gff.gz	application/gzip	5165555	MD5 0efd344890638d3bd1dcfdc6b2a705d0
daUtrGibb.v01.v01.gff.gz	application/gzip	8409652	MD5 c1f6442e25f387a84a393f0faa4ea6fe
md5sums_gzipped.txt	text/plain	621	MD5 0e162d04bf83dd30f9b2f065a70fa069
daUtrGibb.v01.v01.cds.fasta.gz	application/gzip	8818539	MD5 81ff27c41633b009564593b709eee512
daUtrGibb.v01.v01.pep.fasta.gz	application/gzip	5748476	MD5 f4797b23721866dc6eb5e8ef0c8663e9
README_daUtrGibb.md	text/markdown	6356	MD5 634fceb9950ee544fdf87b7a51511f5f

Citation

Meckoni, Samuel Nestor; Vieira Salgado de Oliveira, Julie Anne; Pucker, Boas, 2026-06-24, Utricularia gibba genome sequence and annotation, doi:10.60507/FK2/JJ5QZX, V1.0

Additional Dataverse fields

Id	761
Dataset Type	dataset
Internal Version Number	14
Latest Version Publishing State	RELEASED
Release Time	2026-06-24T12:57:40Z
Create Time	2026-06-24T09:59:57Z
Citation Date	2026-06-24
File Access Request	True

Export metadata

Static metadata exports available for this published dataset version:

Complete Dataverse metadata

Citation Metadata

Title title

Utricularia gibba genome sequence and annotation

Author author

Author Name
Meckoni, Samuel Nestor
Author Affiliation
University of Bonn
Author Identifier Scheme
ORCID
Author Identifier
Type Name
authorIdentifier
Multiple
False
Type Class
primitive
Value
https://orcid.org/0000-0003-4877-8762
Expandedvalue
Person Name
Meckoni, Samuel Nestor
@id
https://orcid.org/0000-0003-4877-8762
Scheme
ORCID
@type
https://schema.org/Person
Author Name
Vieira Salgado de Oliveira, Julie Anne
Author Affiliation
University of Bonn
Author Identifier Scheme
ORCID
Author Identifier
Type Name
authorIdentifier
Multiple
False
Type Class
primitive
Value
https://orcid.org/0000-0001-9930-6373
Expandedvalue
Person Name
Vieira Salgado de Oliveira, Julie Anne
@id
https://orcid.org/0000-0001-9930-6373
Scheme
ORCID
@type
https://schema.org/Person
Author Name
Pucker, Boas
Author Affiliation
University of Bonn
Author Identifier Scheme
ORCID
Author Identifier
0000-0002-3321-7471

Dataset Contact datasetContact

Dataset Contact Name
Pucker, Boas
Dataset Contact Affiliation
University of Bonn
Dataset Contact Email
pucker@uni-bonn.de
Dataset Contact Name
Meckoni, Samuel Nestor
Dataset Contact Affiliation
University of Bonn
Dataset Contact Email
meckoni@uni-bonn.de

Ds Description dsDescription

Ds Description Value
The genome of an Utricularia gibba plant was sequenced with nanopore long reads. The genome sequence was assembled with hifiasm and the gene models were predicted by Helixer, BRAKER3 and GeMoMa. The functional annotation was predicted based on sequence similarity to well characterized Arabidopsis thaliana sequences.

Subject subject

Other

Subject Refinement subjectRefinement

Subject Refinement Value
Plant Sciences [202]

Free Keyword freeKeyword

Free Keyword Value
Utricularia gibba
Free Keyword Value
genome sequence
Free Keyword Value
genome annotation
Free Keyword Value
long read sequencing
Free Keyword Value
carnivorous plants

Depositor depositor

Meckoni, Samuel

Date Of Deposit dateOfDeposit

2026-06-24

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