|
View: |
Part 1: Document Description
|
|
Citation |
|
|---|---|
|
Title: |
Purple and White Aquilegia vulgaris genome sequence and annotation V2 |
|
Identification Number: |
doi:10.60507/FK2/GKLMOG |
|
Distributor: |
bonndata |
|
Date of Distribution: |
2026-01-20 |
|
Version: |
1 |
|
Bibliographic Citation: |
Vieira Salgado de Oliveira, Julie Anne; Friedhoff, Ronja; Katharina Wolff; Pucker, Boas, 2026, "Purple and White Aquilegia vulgaris genome sequence and annotation V2", https://doi.org/10.60507/FK2/GKLMOG, bonndata, V1 |
|
Citation |
|
|
Title: |
Purple and White Aquilegia vulgaris genome sequence and annotation V2 |
|
Identification Number: |
doi:10.60507/FK2/GKLMOG |
|
Authoring Entity: |
Vieira Salgado de Oliveira, Julie Anne (University of Bonn) |
|
Friedhoff, Ronja (TU Braunschweig) |
|
|
Katharina Wolff (University of Bonn) |
|
|
Pucker, Boas (University of Bonn) |
|
|
Grant Number: |
Forschungszentrum Jülich and W-de.NBI-001, W-de.NBI-004, W-de.NBI-008, W-de.NBI-010, W-de.NBI-013, W-de.NBI-014, W-de.NBI-016, W-de.NBI-022 |
|
Distributor: |
bonndata |
|
Access Authority: |
Boas Pucker |
|
Depositor: |
Vieira Salgado de Oliveira, Julie Anne |
|
Date of Deposit: |
2026-01-14 |
|
Holdings Information: |
https://doi.org/10.60507/FK2/GKLMOG |
|
Study Scope |
|
|
Keywords: |
Medicine, Health and Life Sciences |
|
Abstract: |
Here we present high-quality genome sequences and annotations of Aquilegia vulgaris (commonly known as columbine), a widespread ornamental plant renowned for its extensive flower color variation. The study uncovers the flavonoid biosynthesis gene repertoire underlying anthocyanin pigmentation in this species. Using ONT long-read sequencing data, highly continuous genome assemblies were generated for both a purple-flowering and a white-flowering A. vulgaris. This data publication contains the genome sequences with corresponding structural annotations. |
|
Methodology and Processing |
|
|
Sources Statement |
|
|
Data Access |
|
|
Notes: |
<a href="http://creativecommons.org/licenses/by/4.0">CC BY 4.0</a> |
|
Other Study Description Materials |
|
|
Related Studies |
|
|
https://doi.org/10.24355/dbbs.084-202410280909-0 |
|
|
Related Publications |
|
|
Citation |
|
|
Title: |
de Oliveira, J. A. V. S., Friedhoff R., Wolff K., Pucker B. (2024). Genome sequence of the ornamental plant Aquilegia vulgaris reveals the flavonoid biosynthesis gene repertoire. bioRxiv 2024.12.16.628782; doi: 10.1101/2024.12.16.628782 |
|
Identification Number: |
10.1101/2024.12.16.628782 |
|
Bibliographic Citation: |
de Oliveira, J. A. V. S., Friedhoff R., Wolff K., Pucker B. (2024). Genome sequence of the ornamental plant Aquilegia vulgaris reveals the flavonoid biosynthesis gene repertoire. bioRxiv 2024.12.16.628782; doi: 10.1101/2024.12.16.628782 |
|
Label: |
Aquilegia_vulgaris_purple.anno.gff.gz |
|
Text: |
purple structural annotation |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_purple.anno.txt.gz |
|
Text: |
purple functional annotation |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_purple.cds.fasta.gz |
|
Text: |
CDS |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_purple.genomic.fasta.gz |
|
Text: |
Purple genome sequence |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_purple.pep.fasta.gz |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_white.anno.gff.gz |
|
Text: |
white structural annotation |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_white.anno.txt.gz |
|
Text: |
white functional annotation |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_white.cds.fasta.gz |
|
Text: |
CDS |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_white.genomic.fasta.gz |
|
Text: |
White genome sequence |
|
Notes: |
application/gzip |
|
Label: |
Aquilegia_vulgaris_white.pep.fasta.gz |
|
Notes: |
application/gzip |
|
Label: |
README.txt |
|
Notes: |
text/plain |