Purple and White Aquilegia vulgaris genome sequence and annotation V2

Name: Purple and White Aquilegia vulgaris genome sequence and annotation V2
Published: 2026-01-20
License: http://creativecommons.org/licenses/by/4.0

Open this dataset in the live repository

Important usage condition: Use and redistribution are governed by CC BY 4.0. Review and comply with the license before using the data.

Persistent identifier: doi:10.60507/FK2/GKLMOG
Published version: 1.0
Publication date: 2026-01-20
License: CC BY 4.0

Description

Here we present high-quality genome sequences and annotations of Aquilegia vulgaris (commonly known as columbine), a widespread ornamental plant renowned for its extensive flower color variation. The study uncovers the flavonoid biosynthesis gene repertoire underlying anthocyanin pigmentation in this species. Using ONT long-read sequencing data, highly continuous genome assemblies were generated for both a purple-flowering and a white-flowering A. vulgaris. This data publication contains the genome sequences with corresponding structural annotations.

Creators

Vieira Salgado de Oliveira, Julie Anne
Friedhoff, Ronja
Katharina Wolff
Pucker, Boas

Keywords

genome sequence, flavonoids, anthocyanins, flower color, Aquilegia vulgaris

Files

Before downloading: Use and redistribution are governed by CC BY 4.0. Review and comply with the license before using the data.

File	Type	Bytes	Checksum
Aquilegia_vulgaris_purple.pep.fasta.gz	application/gzip	6529281	MD5 306e2e381d2eeef13e1e58aceed3a22a
Aquilegia_vulgaris_white.genomic.fasta.gz	application/gzip	78494074	MD5 19b0b7f3b20b4cb41cf240b227d63dee
Aquilegia_vulgaris_purple.genomic.fasta.gz	application/gzip	91246714	MD5 0383ed1982a00cd787d709ce9619c4cd
Aquilegia_vulgaris_purple.cds.fasta.gz	application/gzip	9898794	MD5 102d243d1e238cce2c96ea3cd73518be
Aquilegia_vulgaris_purple.anno.gff.gz	application/gzip	7272523	MD5 f18485ff386be3efa11ca450a68c1930
Aquilegia_vulgaris_white.pep.fasta.gz	application/gzip	7301771	MD5 c2ece3c40e6a33ed9c65f9f808b2d7bb
Aquilegia_vulgaris_white.cds.fasta.gz	application/gzip	11153644	MD5 66c4eb00ceda12e58b8df32bedeea8a8
Aquilegia_vulgaris_purple.anno.txt.gz	application/gzip	618123	MD5 71dd44ac5beb50d3c944904890d57317
Aquilegia_vulgaris_white.anno.txt.gz	application/gzip	594872	MD5 aba466132ad5e4f134a2be437c495ea5
Aquilegia_vulgaris_white.anno.gff.gz	application/gzip	7691707	MD5 00b507aa9bd8f4ca2e0a623ba2e92a4f
README.txt	text/plain	5878	MD5 84a10b3f271d6ffa05eb32c1cbd51f98

Citation

Vieira Salgado de Oliveira, Julie Anne; Friedhoff, Ronja; Katharina Wolff; Pucker, Boas, 2026-01-20, Purple and White Aquilegia vulgaris genome sequence and annotation V2, doi:10.60507/FK2/GKLMOG, V1.0

Additional Dataverse fields

Id	561
Dataset Type	dataset
Internal Version Number	27
Latest Version Publishing State	RELEASED
Release Time	2026-01-20T15:21:27Z
Create Time	2026-01-14T17:52:53Z
Citation Date	2026-01-20
File Access Request	True

Export metadata

Static metadata exports available for this published dataset version:

Complete Dataverse metadata

Citation Metadata

Title title

Purple and White Aquilegia vulgaris genome sequence and annotation V2

Author author

Author Name
Vieira Salgado de Oliveira, Julie Anne
Author Affiliation
University of Bonn
Author Identifier Scheme
ORCID
Author Identifier
Type Name
authorIdentifier
Multiple
False
Type Class
primitive
Value
https://orcid.org/0000-0001-9930-6373
Expandedvalue
Person Name
Vieira Salgado de Oliveira, Julie Anne
@id
https://orcid.org/0000-0001-9930-6373
Scheme
ORCID
@type
https://schema.org/Person
Author Name
Friedhoff, Ronja
Author Affiliation
TU Braunschweig
Author Identifier Scheme
ORCID
Author Identifier
Type Name
authorIdentifier
Multiple
False
Type Class
primitive
Value
https://orcid.org/0009-0002-0270-4661
Expandedvalue
Person Name
Friedhoff, Ronja
@id
https://orcid.org/0009-0002-0270-4661
Scheme
ORCID
@type
https://schema.org/Person
Author Name
Katharina Wolff
Author Affiliation
University of Bonn
Author Identifier Scheme
ORCID
Author Identifier
0000-0002-3616-0482
Author Name
Pucker, Boas
Author Affiliation
University of Bonn
Author Identifier Scheme
ORCID
Author Identifier
Type Name
authorIdentifier
Multiple
False
Type Class
primitive
Value
https://orcid.org/0000-0002-3321-7471
Expandedvalue
Person Name
Pucker, Boas
@id
https://orcid.org/0000-0002-3321-7471
Scheme
ORCID
@type
https://schema.org/Person

Dataset Contact datasetContact

Dataset Contact Name
Boas Pucker
Dataset Contact Affiliation
University of Bonn
Dataset Contact Email
pucker@uni-bonn.de

Ds Description dsDescription

Ds Description Value
Here we present high-quality genome sequences and annotations of Aquilegia vulgaris (commonly known as columbine), a widespread ornamental plant renowned for its extensive flower color variation. The study uncovers the flavonoid biosynthesis gene repertoire underlying anthocyanin pigmentation in this species. Using ONT long-read sequencing data, highly continuous genome assemblies were generated for both a purple-flowering and a white-flowering A. vulgaris. This data publication contains the genome sequences with corresponding structural annotations.
Ds Description Date
2025-07-10

Subject subject

Medicine, Health and Life Sciences

Free Keyword freeKeyword

Free Keyword Value
genome sequence
Free Keyword Value
flavonoids
Free Keyword Value
anthocyanins
Free Keyword Value
flower color
Free Keyword Value
Aquilegia vulgaris

Publication publication

Publication Relation Type
Cites
Publication Citation
de Oliveira, J. A. V. S., Friedhoff R., Wolff K., Pucker B. (2024). Genome sequence of the ornamental plant Aquilegia vulgaris reveals the flavonoid biosynthesis gene repertoire. bioRxiv 2024.12.16.628782; doi: 10.1101/2024.12.16.628782
Publication IDType
doi
Publication IDNumber
10.1101/2024.12.16.628782
Publication URL
https://doi.org/10.1101/2024.12.16.628782

Language language

English

Grant Number grantNumber

Grant Number Agency
German Network for Bioinformatics Infrastructure (de.NBI) and ELIXIR-DE
Grant Number Value
Forschungszentrum Jülich and W-de.NBI-001, W-de.NBI-004, W-de.NBI-008, W-de.NBI-010, W-de.NBI-013, W-de.NBI-014, W-de.NBI-016, W-de.NBI-022

Depositor depositor

Vieira Salgado de Oliveira, Julie Anne

Date Of Deposit dateOfDeposit

2026-01-14

Related Datasets relatedDatasets

https://doi.org/10.24355/dbbs.084-202410280909-0

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