<codeBook xmlns="ddi:codebook:2_5" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="ddi:codebook:2_5 https://ddialliance.org/Specification/DDI-Codebook/2.5/XMLSchema/codebook.xsd" version="2.5" xml:lang="de-DE"><docDscr><citation><titlStmt><titl xml:lang="de-DE">Digitalis purpurea genome sequence and annotation V2</titl><IDNo agency="DOI">doi:10.60507/FK2/4KUKXI</IDNo></titlStmt><distStmt><distrbtr source="archive">bonndata</distrbtr><distDate>2025-10-17</distDate></distStmt><verStmt source="archive"><version date="2026-02-15" type="RELEASED">2</version></verStmt><biblCit>Horz, Jakob; Wolff, Katharina; Friedhoff, Ronja; Pucker, Boas, 2025, "Digitalis purpurea genome sequence and annotation V2", https://doi.org/10.60507/FK2/4KUKXI, bonndata, V2</biblCit></citation></docDscr><stdyDscr><citation><titlStmt><titl xml:lang="de-DE">Digitalis purpurea genome sequence and annotation V2</titl><IDNo agency="DOI">doi:10.60507/FK2/4KUKXI</IDNo></titlStmt><rspStmt><AuthEnty affiliation="University of Bonn">Horz, Jakob</AuthEnty><AuthEnty affiliation="University of Bonn">Wolff, Katharina</AuthEnty><AuthEnty affiliation="TU Braunschweig">Friedhoff, Ronja</AuthEnty><AuthEnty affiliation="University of Bonn">Pucker, Boas</AuthEnty></rspStmt><prodStmt/><distStmt><distrbtr source="archive">bonndata</distrbtr><contact affiliation="University of Bonn" email="pucker@uni-bonn.de">Pucker, Boas</contact><depositr>Pucker, Boas</depositr><depDate>2025-10-12</depDate></distStmt><holdings URI="https://doi.org/10.60507/FK2/4KUKXI"/></citation><stdyInfo><subject><keyword xml:lang="en">Medicine, Health and Life Sciences</keyword><keyword xml:lang="de-DE">Medicine, Health and Life Sciences</keyword></subject><abstract date="2025-10-16" xml:lang="de-DE">Here we present a high-quality genome sequence and annotation of Digitalis purpurea (commonly known as foxglove), a plant valued both for its ornamental flowers and for producing the cardiac drug digoxin. The study aims to uncover the genetic basis of flower color variation in this species. Using ONT long-read sequencing data, we assembled the genome sequence of a magenta-flowering D. purpurea individual. We performed extensive gene prediction and functional annotation of protein-coding genes. Genes of the flavonoid biosynthesis were compared between magenta and white flowering individuals. Expression patterns were compared between different plant organs and between plants with different flower colors. Through these analyses, we identified a large insertion in the anthocyanidin synthase (ANS) that explains the differences between magenta and white flowers. 
This data publication contains the genome sequence with the corresponding annotation V2.</abstract><sumDscr/></stdyInfo><method><dataColl><sources/></dataColl><anlyInfo/></method><dataAccs><setAvail/><useStmt/><notes type="DVN:TOU" level="dv">&lt;a href="http://creativecommons.org/licenses/by/4.0">CC BY 4.0&lt;/a></notes></dataAccs><othrStdyMat><relStdy>https://doi.org/10.24355/dbbs.084-202311130950-0</relStdy><relPubl><citation><titlStmt><titl>Horz J. M., Wolff K., Friedhoff R., Pucker B. (2025). Genome sequence of the ornamental plant Digitalis purpurea reveals the molecular basis of flower color and morphology variation. bioRxiv. doi: 10.1101/2024.02.14.580303.</titl><IDNo agency="doi">10.1101/2024.02.14.580303</IDNo></titlStmt><biblCit>Horz J. M., Wolff K., Friedhoff R., Pucker B. (2025). Genome sequence of the ornamental plant Digitalis purpurea reveals the molecular basis of flower color and morphology variation. bioRxiv. doi: 10.1101/2024.02.14.580303.</biblCit></citation><ExtLink URI="https://doi.org/10.1101/2024.02.14.580303"/></relPubl></othrStdyMat></stdyDscr><otherMat ID="f13971" URI="https://bonndata.uni-bonn.de/catalog/downloads/13971/DR1_v1.annoV2.anno.gff.gz" level="datafile"><labl>DR1_v1.annoV2.anno.gff.gz</labl><txt>structural annotation</txt><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/gzip</notes></otherMat><otherMat ID="f13970" URI="https://bonndata.uni-bonn.de/catalog/downloads/13970/DR1_v1.annoV2.anno.txt.gz" level="datafile"><labl>DR1_v1.annoV2.anno.txt.gz</labl><txt>functional annotation</txt><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/gzip</notes></otherMat><otherMat ID="f13968" URI="https://bonndata.uni-bonn.de/catalog/downloads/13968/DR1_v1.annoV2.cds.fasta.gz" level="datafile"><labl>DR1_v1.annoV2.cds.fasta.gz</labl><txt>CDS</txt><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/gzip</notes></otherMat><otherMat ID="f13973" URI="https://bonndata.uni-bonn.de/catalog/downloads/13973/DR1_v1.annoV2.genome.fasta.gz" level="datafile"><labl>DR1_v1.annoV2.genome.fasta.gz</labl><txt>genome sequence</txt><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/gzip</notes></otherMat><otherMat ID="f14003" URI="https://bonndata.uni-bonn.de/catalog/downloads/14003/DR1_v1.annoV2.pep.fasta.gz" level="datafile"><labl>DR1_v1.annoV2.pep.fasta.gz</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/gzip</notes></otherMat><otherMat ID="f15875" URI="https://bonndata.uni-bonn.de/catalog/downloads/15875/DR1_v1.annoV2.TEanno.gff3.gz" level="datafile"><labl>DR1_v1.annoV2.TEanno.gff3.gz</labl><txt>TE annotation</txt><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/gzip</notes></otherMat><otherMat ID="f14002" URI="https://bonndata.uni-bonn.de/catalog/downloads/14002/DR1_v1.annoV2.tpms.txt.gz" level="datafile"><labl>DR1_v1.annoV2.tpms.txt.gz</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/gzip</notes></otherMat><otherMat ID="f15877" URI="https://bonndata.uni-bonn.de/catalog/downloads/15877/README.txt" level="datafile"><labl>README.txt</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">text/plain</notes></otherMat></codeBook>