<codeBook xmlns="ddi:codebook:2_5" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="ddi:codebook:2_5 https://ddialliance.org/Specification/DDI-Codebook/2.5/XMLSchema/codebook.xsd" version="2.5" xml:lang="en"><docDscr><citation><titlStmt><titl xml:lang="en">Genome annotation of Manihot esculenta (cassava)</titl><IDNo agency="DOI">doi:10.60507/FK2/IHEIMY</IDNo></titlStmt><distStmt><distrbtr source="archive">bonndata</distrbtr><distDate>2026-09-18</distDate></distStmt><verStmt source="archive"><version date="2026-09-18" type="RELEASED">1</version></verStmt><biblCit>Shittu, Moyosore Priscilla; Pucker, Boas, 2026, "Genome annotation of Manihot esculenta (cassava)", https://doi.org/10.60507/FK2/IHEIMY, bonndata, V1</biblCit></citation></docDscr><stdyDscr><citation><titlStmt><titl xml:lang="en">Genome annotation of Manihot esculenta (cassava)</titl><IDNo agency="DOI">doi:10.60507/FK2/IHEIMY</IDNo></titlStmt><rspStmt><AuthEnty affiliation="University of Bonn">Shittu, Moyosore Priscilla</AuthEnty><AuthEnty affiliation="University of Bonn">Pucker, Boas</AuthEnty></rspStmt><prodStmt/><distStmt><distrbtr source="archive">bonndata</distrbtr><contact affiliation="University of Bonn" email="pucker@uni-bonn.de">Pucker, Boas</contact><depositr>Shittu, Moyosore Priscilla</depositr><depDate>2026-09-18</depDate></distStmt><holdings URI="https://doi.org/10.60507/FK2/IHEIMY"/></citation><stdyInfo><subject><keyword xml:lang="en">Agricultural Sciences</keyword><keyword xml:lang="en">Medicine, Health and Life Sciences</keyword><keyword xml:lang="en">Other</keyword></subject><abstract date="2026-09-18" xml:lang="en">The genome annotation of 11 Manihot esculenta (cassava) cultivars retrieved from the NCBI genome database. We predicted gene models using the homology-based annotation tool GeMoMa, using Jatropha curcas and Hevea brasiliensis, both close relatives of cassava within the Euphorbiaceae, as reference gene models. This annotation resource was generated to support a comparative genomics investigation into the genetic basis of intraspecific pigmentation differences in cassava, with a particular focus on the MYB-bHLH-WD40 (MBW) regulatory complex controlling anthocyanin biosynthesis (R2R3-MYB and R3-MYB activators/repressors and their bHLH partners). This data publication contains the coding sequences, predicted polypeptide sequences, and structural annotations (GFF3) for each of the 11 cultivars.</abstract><sumDscr/></stdyInfo><method><dataColl><sources/></dataColl><anlyInfo/></method><dataAccs><setAvail/><useStmt/><notes type="DVN:TOU" level="dv">&lt;a href="http://creativecommons.org/licenses/by/4.0">CC BY 4.0&lt;/a></notes></dataAccs><othrStdyMat><relPubl><citation><titlStmt><titl>Moyosore Priscilla Shittu &amp; Boas Pucker (2026). Comparative Genomics Reveals
Genetic Factors Associated with Intraspecific Pigmentation Differences in Cassava bioRxiv 2026.09.18.752618; doi:10.1101/2026.09.18.752618</titl></titlStmt><biblCit>Moyosore Priscilla Shittu &amp; Boas Pucker (2026). Comparative Genomics Reveals
Genetic Factors Associated with Intraspecific Pigmentation Differences in Cassava bioRxiv 2026.09.18.752618; doi:10.1101/2026.09.18.752618</biblCit></citation></relPubl></othrStdyMat></stdyDscr><otherMat ID="f88741" URI="https://bonndata.uni-bonn.de/api/access/datafile/88741" level="datafile"><labl>GCA_000737105.1_MW_v2d.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88740" URI="https://bonndata.uni-bonn.de/api/access/datafile/88740" level="datafile"><labl>GCA_000737115.1_MK_v2b.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88742" URI="https://bonndata.uni-bonn.de/api/access/datafile/88742" level="datafile"><labl>GCA_003957885.1_ASM395788v1.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88744" URI="https://bonndata.uni-bonn.de/api/access/datafile/88744" level="datafile"><labl>GCA_003957995.1_ASM395799v1.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88739" URI="https://bonndata.uni-bonn.de/api/access/datafile/88739" level="datafile"><labl>GCA_013618965.1_ASM1361896v1.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88738" URI="https://bonndata.uni-bonn.de/api/access/datafile/88738" level="datafile"><labl>GCA_020916425.1_hifiasm_hap2.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88736" URI="https://bonndata.uni-bonn.de/api/access/datafile/88736" level="datafile"><labl>GCA_020916445.1_hifiasm_hap1.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88737" URI="https://bonndata.uni-bonn.de/api/access/datafile/88737" level="datafile"><labl>GCA_033783075.1_ASM3378307v1.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88734" URI="https://bonndata.uni-bonn.de/api/access/datafile/88734" level="datafile"><labl>GCA_033783085.1_ASM3378308v1.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88743" URI="https://bonndata.uni-bonn.de/api/access/datafile/88743" level="datafile"><labl>GCA_963409055.1_TME3.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88735" URI="https://bonndata.uni-bonn.de/api/access/datafile/88735" level="datafile"><labl>GCA_963409065.1_60444.zip</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">application/zip</notes></otherMat><otherMat ID="f88746" URI="https://bonndata.uni-bonn.de/api/access/datafile/88746" level="datafile"><labl>README.txt</labl><notes level="file" type="DATAVERSE:CONTENTTYPE" subject="Content/MIME Type">text/plain</notes></otherMat></codeBook>