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Part 1: Document Description
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Citation |
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Title: |
Genome sequence and annotation of Victoria cruziana |
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Identification Number: |
doi:10.60507/FK2/5DS0JZ |
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Distributor: |
bonndata |
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Date of Distribution: |
2025-07-22 |
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Version: |
1 |
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Bibliographic Citation: |
Nowak, Melina Sophie; Harder, Benjamin; Meckoni, Samuel Nestor; Friedhoff, Ronja; Wolff, Katharina; Pucker, Boas, 2025, "Genome sequence and annotation of Victoria cruziana", https://doi.org/10.60507/FK2/5DS0JZ, bonndata, V1 |
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Citation |
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Title: |
Genome sequence and annotation of Victoria cruziana |
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Identification Number: |
doi:10.60507/FK2/5DS0JZ |
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Authoring Entity: |
Nowak, Melina Sophie (TU Braunschweig) |
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Harder, Benjamin (TU Braunschweig) |
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Meckoni, Samuel Nestor (University of Bonn) |
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Friedhoff, Ronja (TU Braunschweig) |
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Wolff, Katharina (University of Bonn) |
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Pucker, Boas (University of Bonn) |
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Distributor: |
bonndata |
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Access Authority: |
Pucker, Boas |
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Depositor: |
Meckoni, Samuel |
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Date of Deposit: |
2025-07-21 |
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Holdings Information: |
https://doi.org/10.60507/FK2/5DS0JZ |
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Study Scope |
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Keywords: |
Other |
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Abstract: |
The genome of a <i>Victoria cruziana</i> plant was sequenced with nanopore long reads. The genome sequence was assembled with Verkko2, scaffolding was conducted with CPhasing and the gene models were predicted by BRAKER3 and GeMoMa. The functional annotation was predicted based on sequence similarity to well characterized Arabidopsis thaliana sequences. |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Notes: |
<a href="http://creativecommons.org/licenses/by/4.0">CC BY 4.0</a> |
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Other Study Description Materials |
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Related Publications |
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Citation |
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Title: |
Nowak M. S.*, Harder B.*, Meckoni S. N.*, Friedhoff R., Wolff K., Pucker B. (2024). Genome sequence and RNA-seq analysis reveal genetic basis of flower coloration in the giant water lily Victoria cruziana. bioRxiv 2024.06.15.599162; doi: 10.1101/2024.06.15.599162. |
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Identification Number: |
10.1101/2024.06.15.599162 |
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Bibliographic Citation: |
Nowak M. S.*, Harder B.*, Meckoni S. N.*, Friedhoff R., Wolff K., Pucker B. (2024). Genome sequence and RNA-seq analysis reveal genetic basis of flower coloration in the giant water lily Victoria cruziana. bioRxiv 2024.06.15.599162; doi: 10.1101/2024.06.15.599162. |
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Label: |
README_Victoria_cruziana.txt |
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Notes: |
text/plain |
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Label: |
Victoria_cruziana_VB03.tar.gz |
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Text: | |
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Notes: |
application/gzip |